PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g01710.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 114aa    MW: 13104.1 Da    PI: 11.7197
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g01710.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.42.6e-1170101338
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38 
                     ykG+r+++ +g+W++eIrdp++     r++lg+f t
  Vang01g01710.1  70 YKGIRRRP-WGKWAVEIRDPRK---GIRVWLGTFAT 101
                     9*******.**********954...3********99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.2E-1569102IPR001471AP2/ERF domain
PROSITE profilePS5103214.48669101IPR001471AP2/ERF domain
SMARTSM003804.0E-469112IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-969101IPR016177DNA-binding domain
PRINTSPR003671.6E-67081IPR001471AP2/ERF domain
PfamPF008477.7E-670101IPR001471AP2/ERF domain
CDDcd000182.38E-147099No hitNo description
PRINTSPR003671.6E-692108IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MCGGSIISDF IEVHIKNAPE STTHHLFSQL HTFNATSSST LIKVEETCEK VKNSRVIAEK  60
GGALVWKNTY KGIRRRPWGK WAVEIRDPRK GIRVWLGTFA TRLRHRRRTH PRR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-116AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014507851.16e-55PREDICTED: ethylene-responsive transcription factor RAP2-3-like isoform X2
SwissprotP427366e-21RAP23_ARATH; Ethylene-responsive transcription factor RAP2-3
TrEMBLA0A0S3RL446e-79A0A0S3RL44_PHAAN; Uncharacterized protein
STRINGGLYMA09G04630.12e-22(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.11e-22ERF family protein